# Functional Segmentation of the Methylome

## Documentation for package ‘methFuse’ version 1.1.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

fuse.cluster | Perform Hierarchical Clustering on Methylation Data
fuse.cluster.BSseq | Perform Hierarchical Clustering on Methylation Data
fuse.cluster.default | Perform Hierarchical Clustering on Methylation Data
fuse.cluster.methrix | Perform Hierarchical Clustering on Methylation Data
fuse.cut.tree | Cut Hierarchical Clustering Tree into Clusters
fuse.segment | Full FUSE segmentation pipeline
fuse.segment.BSseq | Full FUSE segmentation pipeline
fuse.segment.default | Full FUSE segmentation pipeline
fuse.segment.methrix | Full FUSE segmentation pipeline
fuse.summary | Summarize FUSE Segmentation Results
number.of.clusters | Find Optimal Number of Clusters
plot.fuse_summary | Plot method for FUSE segmentation results