Heterogeneous Methods for Shape and Other Multidimensional Data

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Documentation for package ‘GeometricMorphometricsMix’ version 0.6.0.1

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

adjRand_test	Test the significance of the adjusted Rand index
arching_vector	Body arching vector from brown trout study
brown_trout	Brown trout landmark data
BTailTest	BTailTest for difference in disparity/morphospace occupation
critical_angle	Compute the critical angle for the test of the angle between two multivariate vectors
disparity_resample	Resampling-based estimates (bootstrap or rarefaction) of disparity / morphospace occupation
disparity_test	Permutation test of difference in disparity/morphospace occupation
dist_mean_boot	Bootstrapped distance between two arrays
EscoufierRV	Escoufier RV coefficient
Kmultparallel	Parallel implementation of Adams' Kmult with additional support for multiple datasets and tree sets
LM_relativepos_check	Check the relative positions for a set of landmarks, compared to a reference specimen
parallel_analysis	Perform parallel analysis
plot.disparity_resample	Plot method for disparity_resample objects
plot.EscoufierRVrarefy	Plot method for EscoufierRVrarefy objects
plot.parallel_Kmult	Plot method for parallel_Kmult objects
pls	Partial least squares (PLS) analysis
pls_major_axis	Major axis predictions for partial least squares (PLS) analysis
print.disparity_resample	Print method for disparity_resample objects
print.EscoufierRVrarefy	Print method for EscoufierRVrarefy objects
print.parallel_Kmult	Print method for parallel_Kmult objects
ProjectOrthogonal	Project to subspace orthogonal to a vector
repeated_measures_test	Perform test on two repeated measures
rescale_by_landmark_distance	Rescale landmark data based on interlandmark distances
reversePCA	'Reverse' PCA
rotate_landmarks	User-defined rotation of a landmark configuration
RVcomparison	Compare Escoufier RV coefficient between groups
RVrarefied	Rarefied version of Escoufier RV coefficient
scaled_variance_of_eigenvalues	Compute scaled variance of eigenvalues
summary.parallel_Kmult	Summary method for parallel_Kmult objects
TestOfAngle	Perform a test of the angle between two multivariate vectors