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object --+
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AbstractSequence --+
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Sequence
High-performance sequence object. The actual sequence is stored internally as a string. The indexer acts as a residue factory, which creates a new ResidueInfo instance each time.
Note: This class was created with parsing large volumes of data in mind. This comes at the expense of degraded performance of the sequence indexer.
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| AbstractSequence |
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__abstractmethods__ =
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| str |
sequence The actual sequence |
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| Method Details |
x.__init__(...) initializes x; see help(type(x)) for signature
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Extract a subsequence, defined by a list of 1-based positions.
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Remove all gaps and insertions from the sequence.
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Extract a subsequence, defined by [start, end]. The start and end positions are 1-based, inclusive.
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| Property Details |
sequenceThe actual sequence
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