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object --+
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sequence.AbstractAlignment --+
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sequence.SequenceAlignment --+
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HHpredHitAlignment
Represents a query-template alignment in an HHpred result.
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| csb.bio.sequence.A3MAlignment |
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GAP = GAP
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| Properties | |
| str |
query Query sequence (with gaps) |
| generator |
segments Find all ungapped query-subject segments in the alignment. |
| str |
subject Subject sequence (with gaps) |
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Inherited from Inherited from |
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| Method Details |
x.__init__(...) initializes x; see help(type(x)) for signature
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| Property Details |
queryQuery sequence (with gaps)
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segmentsFind all ungapped query-subject segments in the alignment. Return a generator over all ungapped alignment segments, represented by HHpredHit objects
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subjectSubject sequence (with gaps)
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