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object --+
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Clans
Class for holding and manipulating data from one CLANS file. Initialization is always done as empty clustermap with default parameters.
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| ClansEntry |
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Inherited from |
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| Properties | |
| list |
entries list of clustermap ClansEntrys. |
| str or None |
filename file from which the data was parsed |
| ClansParams |
params ClansParams that contains the parameters set for this Clans instance. |
| numpy.array |
rotmtx 3x3 rotation matrix that indicates the rotation state of the clustermap |
| list |
seqgroups list of ClansSeqgroups defined in the clustermap. |
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Inherited from |
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| Method Details |
x.__init__(...) initializes x; see help(type(x)) for signature
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str(x)
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str(x)
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Adds an new entry.
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Adds a new group.
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Append the ClansSeqgroup-s of
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Checks if an entry with name
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Removes an entry.
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Removes an entry fetched by its name.
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Removes a group.
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Removes all entries whose name is not in keep_names
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removes all ClansEntrys that have no connections above the
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Sorts the ClansEntrys by their name or by a custom comparison function.
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writes the Clans instance to a file in CLANS format
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| Property Details |
entrieslist of clustermap ClansEntrys.
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filenamefile from which the data was parsed
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paramsClansParams that contains the parameters set for this Clans instance.
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rotmtx3x3 rotation matrix that indicates the rotation state of the clustermap raises ValueError if rotation matrix shape is not 3x3
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seqgroupslist of ClansSeqgroups defined in the clustermap.
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