{% extends "layout.html" %} {% from "overview/institute_sidebar.html" import institute_actionbar %} {% from "utils.html" import db_table_external_scripts, db_table_external_stylesheets %} {% block title %} {{ super() }} - Institutes {% endblock %} {% block css %} {{ super() }} {{ db_table_external_stylesheets() }} {% endblock %} {% block top_nav %} {{ super() }} {% endblock %} {% block content_main %}
{{ mme_submitted() }}
{% endblock %} {% macro mme_submitted() %} {% for case in mme_cases %} {% endfor %}
Case Name Synopsis Status Case Assignees MME Submission Updated MME Patient(s) MME Phenotype Features MME Genomic Features
{{ case.display_name }} {% set collapse_id = 'collapse-' + case._id %} {% set max_chars = 300 %} {% if case.synopsis and case.synopsis|length > max_chars %}
{{ case.synopsis[:max_chars] }}…
{{ case.synopsis }}
{% else %} {{ case.synopsis or 'NA' }} {% endif %}
{{ case.status }} {% for assignee in case.assignees %}
{{ assignee }}
{% endfor %}
{{ case.mme_submission.updated_at.strftime('%Y-%m-%d %H:%M') }} {% for patient in case.mme_submission.patients %}
{{ patient.label }} ({{ patient.sex }})
Contact: {{ patient.contact.name }} - {{ patient.contact.href }}
{% endfor %}
{% for disorder in case.mme_submission.disorders %}
{{ disorder.label }} ({{ disorder.id }})
{% endfor %}
{% for patient in case.mme_submission.patients %} {% for gf in patient.genomicFeatures %}
{{ gf.gene.id }}
{% if gf.variant %} Chr{{ gf.variant.referenceName }}: {{ gf.variant.start|human_longint|safe }}-{{ gf.variant.end|human_longint|safe }}
{{ gf.variant.referenceBases }} → {{ gf.variant.alternateBases }}
Assembly: {{ gf.variant.assembly }}
Zygosity: {{ gf.zygosity }} {% endif %}

{% endfor %} {% endfor %}
{% endmacro %} {% block scripts %} {{ super() }} {{ db_table_external_scripts() }} {% endblock %}