{% from "cases/chanjo2_form.html" import chanjo2_report_form %} {% from "variant/buttons.html" import variant_tag_button, variant_tier_button, dismiss_variant_button, mosaic_variant_button %} {% from "variants/utils.html" import compounds_table %} {% from "variant/buttons.html" import reviewer_button, splice_junctions_button %} {% from "variant/utils.html" import igv_track_selection %} {% macro clinsig_table(variant) %} {% if variant.clinsig_human %}
CLINSIG | Accession | Revstat | |
---|---|---|---|
{{ clinsig.human }} {% if clinsig.low_penetrance %}(low penetrance){% endif %} | {% if clinsig.accession %}{{ clinsig.accession }} | {% else %}n.a. | {% endif %}{{ clinsig.revstat or "n.a." }} |
Oncogenicity | Disease name | Revstat | {% for classif in variant.clnsig_onc %}
---|---|---|
{{ classif.value|capitalize }} | {{ classif.dn|replace("_", " ")|replace(",", ", ") }} | {{ classif.revstat }} |