{% extends "layout.html" %} {% from "overview/institute_sidebar.html" import institute_actionbar %} {% from "utils.html" import db_table_external_scripts, db_table_external_stylesheets %} {% block title %} {{ super() }} - Institutes {% endblock %} {% block css %} {{ super() }} {{ db_table_external_stylesheets() }} {% endblock %} {% block top_nav %} {{ super() }}
Case Name | Synopsis | Status | Case Assignees | MME Submission Updated | MME Patient(s) | MME Phenotype Features | MME Genomic Features |
---|---|---|---|---|---|---|---|
{{ case.display_name }} |
{% set collapse_id = 'collapse-' + case._id %}
{% set max_chars = 300 %}
{% if case.synopsis and case.synopsis|length > max_chars %}
{{ case.synopsis[:max_chars] }}…
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{{ case.synopsis }}
|
{{ case.status }} |
{% for assignee in case.assignees %}
{{ assignee }}
{% endfor %}
|
{{ case.mme_submission.updated_at.strftime('%Y-%m-%d %H:%M') }} |
{% for patient in case.mme_submission.patients %}
{{ patient.label }} ({{ patient.sex }})
{% endfor %}
Contact: {{ patient.contact.name }} - {{ patient.contact.href }} |
{% for disorder in case.mme_submission.disorders %}
{{ disorder.label }} ({{ disorder.id }})
{% endfor %}
|
{% for patient in case.mme_submission.patients %}
{% for gf in patient.genomicFeatures %}
{{ gf.gene.id }}
{% if gf.variant %} Chr{{ gf.variant.referenceName }}: {{ gf.variant.start|human_longint|safe }}-{{ gf.variant.end|human_longint|safe }} {{ gf.variant.referenceBases }} → {{ gf.variant.alternateBases }} Assembly: {{ gf.variant.assembly }} Zygosity: {{ gf.zygosity }} {% endif %} {% endfor %} {% endfor %} |