{% extends 'sharedTemplates/base.html' %} {% block title %}{{ reference }}{% endblock %} {% block body %}
Information

This table provides a detailed overview of segment annotations across all samples.

For each entry, the following information is displayed:

  • Sample: the name of the annotated sample.
  • Short name: the simplified gene segment name.
  • Start/End coord: the genomic coordinates of the segment on the contig.
  • Status: whether the segment is a known or novel annotation.
  • SNPs / Insertions / Deletions: the number of detected variants compared to the reference.
Use the search bar to filter annotations. Click the blue MSA button to view a multiple sequence alignment for that segment across samples.

Overall report

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{{ column }}
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{% endblock %}