{% extends "webgateway/base/base_header.html" %} {% block content %}
{% if json_configs %}

Please select an attached config file from the list below:

{% else %}

There are no config files attached!

To use the viewer you can attach a .json config file and refresh the panel.

{% endif %}
{% if form %}

Or use the form below to generate a new config file:

{% csrf_token %}
Vitessce viewer configuration
{{ form.config_save.label_tag }} {{ form.config_save.help_text }}
{{ form.config_save }}
{{ form.config_file_name.label_tag }} {{ form.config_file_name.help_text }}
{{ form.config_file_name }}
Images
{{ form.images.label_tag }} {{ form.images.help_text }}
{{ form.images }}
Cell Data
{{ form.segmentation.label_tag }} {{ form.segmentation.help_text }}
{{ form.segmentation }}
{{ form.rois.label_tag }} {{ form.rois.help_text }}
{{ form.rois }}
{{ form.cell_identities.label_tag }} {{ form.cell_identities.help_text }}
{{ form.cell_identities }}
{{ form.cell_id_column.label_tag }} {{ form.cell_id_column.help_text }}
{{ form.cell_id_column }}
{{ form.cell_label_column.label_tag }} {{ form.cell_label_column.help_text }}
{{ form.cell_label_column }}
{{ form.expression.label_tag }} {{ form.expression.help_text }}
{{ form.expression }}
{{ form.embeddings.label_tag }} {{ form.embeddings.help_text }}
{{ form.embeddings }}
{{ form.embedding_x.label_tag }} {{ form.embedding_x.help_text }}
{{ form.embedding_x }}
{{ form.embedding_y.label_tag }} {{ form.embedding_y.help_text }}
{{ form.embedding_y }}
Molecule Data
{{ form.molecule_id.label_tag }} {{form.molecule_id.help_text}}
{{ form.molecules }}
{{ form.molecule_id.label_tag }} {{ form.molecule_id.help_text }}
{{ form.molecule_id }}
{{ form.molecule_label.label_tag }} {{ form.molecule_label.help_text }}
{{ form.molecule_label }}
{{ form.molecule_x.label_tag }} {{ form.molecule_x.help_text }}
{{ form.molecule_x }}
{{ form.molecule_y.label_tag }} {{ form.molecule_y.help_text }}
{{ form.molecule_y }}
Additional views
{{ form.histograms.label_tag }} {{ form.histograms.help_text }}
{{ form.histograms }}
{{ form.heatmap.label_tag }} {{ form.heatmap.help_text }}
{{ form.heatmap }}
{{ form.status.label_tag }} {{ form.status.help_text }}
{{ form.status }}
{{ form.description.label_tag }} {{ form.description.help_text }}
{{ form.description }}
{% else %}

Autogenerating config files requires the omero-web-zarr plugin which seems not to be available.

{% endif %}
{% endblock %}